For most states, you can claim your money right up till the day you begin to work again. Since you didn't work the last two weeks, you are entitled to that pay. Just make sure they now that you have begun to to work again.
I was unemployed and I just started working again today. EDD gave me an alert saying I could certify for the two weeks ago for the weekly benefits. Since I now have a job, do I cancel the claim and not collect the benefits two weeks earlier?